Biomedical Research Tools and Links:
Basic Tools
Enztrez PubMed gateway site
NIH Computational Biology Desk Reference
BCM Search Launcher--Sequence Utilities
ISI Web of Knowledge
Genomics web research tools
ENSEMBL genome browser
MGI databank
The I.M.A.G.E. Consortium
UCSC genome site ("The Golden Path")
Bioinformatics links
FatiGO gene ontogeny
GO Miner (NCI)
iHOP information hyperlinked over proteins
Oncomine cancer microarray database
Human Mutation Database (must register)
MEME (SDSC)
The Gibbs Motif Sampler
PipMaker
GSEA: Gene Set Enrichment Analysis
Expression/developmental web pages
GNF SymAtlas
GenePaint
Oncogenomics Normal Tissue Gene Expression Database
The Caltech uMRI Alas of Mouse Development
The Edinburgh Mouse Atlas Project
Motif/domain/target site identification pages
Scansite
WebLogo (Berkeley)
NetPhos
Pfam HMM motif search (moved to Janelia)
Pfam (Sanger) (seems like the superior site)
Superfamily sequence search
PSSM fold recognition software
Protein domain/proteomics pages
SDSC proteinexplorer front door
RCSB PDB protein data bank
ExPASy Proteomics Server
UCSF ProteinProspector
PredictProtein Server (EMBL-Heidelberg)
Transcription factor pages
Rockefeller's transcription regulator gene name list
TESS (Transcription Element Seach System) at U Penn
TFSEARCH (damn good)
BIOBASE (contains TRANSFAC and PROTEOME, no longer free)
Ig, TCR, MHC
IMGT Homepage
Sequence alignment
LALIGN server
ClustalW
BOXSHADE
Blocks
Database homology searches
BLAST
BLAT
Eukaryotic Promoter Database
Mouse models
Mouse Models of Human Cancers Consortium
IGTC
Bay Genomics
Jax Mouse Model Database
Taconic Mouse Model Database
2006 Charles River Mouse Models (.pdf)
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Biomedical Journals:
Nature Genetics
Cell
Nature
Nature Medicine
Nature Immunology
Science
Molecular Cell
Cancer Cell
Immunity
Genes & Development
Neuron
Nature Cell Biology
Cell Stem Cell
Stem Cells
Cell Metabolism
Nature Biotechnology
Nature Structural & Molecular Biology
PLoS Biology
PLoS Medicine
Journal of Experimental Medicine
The EMBO Journal
Genome Research
Molecular and Cellular Biology
Currrent Biology
Cancer Research
Oncogene
PNAS
Journal of Immunology
RNA
Nature Biotechnology
The Journal of Biological Chemistry
Nucleic Acids Research
Review Journals:
Annual Review of Immunology
Annual Review of Biochemistry
Current Opinion in Cell Biology
Annual Review of Cell and Developmental Biology
TiBS
University of Utah Links :
Campus Directory
Eccles Health Science Library
Eccles Electronic Journals
Bioscience Calendar
Gene Regulation JC Schedule
Pathology Home Page
Cell Biology & Immunology
Pathology R.I.P. + J.C.
Pathology Event Calendar
HSC Core Facilities
Molecular Biology Graduate Program
MD/PhD Combined Program
University of Utah Medical School Student Research Program
Emma Eccles Jones Medical Research Building (A.K.A. EEJ, EEJB, JMRB, JMSB, EEJMRB, EEJR, EEJMS, Building 565, the Biochemistry Building and 15 N Medical Dr East)
External Links :
ERA Commons
RePORT Expenditures and Results (RePORTER) query tool
Study Section Roster (N.I.H.)
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